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用于基因组数据融合的核方法

Kernel methods for genomic data fusion
课程网址: http://videolectures.net/mlsb2012_moreau_kernel/  
主讲教师: Yves Moreau
开课单位: 鲁汶大学
开课时间: 2012-10-23
课程语种: 英语
中文简介:
尽管在组学技术方面取得了重大进展,但鉴定引起罕见遗传疾病的基因以及对这些疾病背后的分子网络的理解仍然很困难。基因优先化尝试整合多个异质数据源以鉴定最可能与病症相关或引起病症的候选基因。这些策略既可用于支持临床基因诊断,也可用于加速生物发现。基因组数据融合算法正在快速成熟的统计学和机器学习技术已经出现,其将复杂的异构信息(例如序列相似性,交互网络,表达数据,注释或生物医学文献)整合到优先化,聚类或预测中。在本次演讲中,我们将特别关注内核方法,并将特别提出几种优先级和聚类策略。我们还通过解决如何将这些策略嵌入到遗传学家的日常实践中来超越学习方法,主要是通过与优先级和网络分析方法紧密结合的协作知识库。
课程简介: Despite significant advances in omics techniques, the identification of genes causing rare genetic diseases and the understanding of the molecular networks underlying those disorders remains difficult. Gene prioritization attempts to integrate multiple, heterogeneous data sources to identify candidate genes most likely to be associated with or causative for a disorder. Such strategies are useful both to support clinical genetic diagnosis and to speed up biological discovery. Genomic data fusion algorithms are rapidly maturing statistical and machine learning techniques have emerged that integrate complex, heterogeneous information (such as sequence similarity, interaction networks, expression data, annotation, or biomedical literature) towards prioritization, clustering, or prediction. In this talk, we will focus in particular on kernel methods and will propose several strategies for prioritization and clustering in particular. We also go beyond learning methods as such by addressing how such strategies can be embedded into the daily practice of geneticists, mostly through collaborative knowledge bases that integrate tightly with prioritization and network analysis methods.
关 键 词: 组学技术; 基因优先化; 遗传疾病
课程来源: 视频讲座网
最后编审: 2019-07-02:cwx
阅读次数: 43