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ALS患者基因组中microRNA基因突变的发现

Discovery of microRNA gene mutations in ALS patient genomes
课程网址: http://videolectures.net/encals2017_eitan_gene_mutations/  
主讲教师: Chen Eitan
开课单位: 魏茨曼科学研究所
开课时间: 2017-07-21
课程语种: 英语
中文简介:
microRNA是一种内源性小RNA,被认为在包括神经退行性变在内的许多病理学中发挥作用。我们最近证明,肌萎缩侧索硬化症(ALS)是一种人类运动神经元系统的神经退行性疾病,其Dicer活性受损,导致miRNA生物合成失调。因此,小鼠Dicer等位基因的条件性缺失足以引起运动神经元疾病。如今,我们正在直接测试ALS患者的microRNA基因是否存在致病突变。为此,我们与MinE项目合作进行了silico capture,该项目从全基因组测序数据中调用特定的感兴趣基因组区域。我们的方法使我们能够捕获所有已知的microRNA基因、它们的蛋白质辅因子和疾病相关基因的3'非翻译区。然后,我们进行了广泛的生物信息学分析,以确定与疾病相关的基因变体,并进一步开发了方法来衡量新发现的miRNA基因突变的影响。通过电子捕获对4300例ALS患者进行miRNA基因突变分析是前所未有的。为揭示非编码RNA遗传学在人类疾病中的中心地位而开发的数据和方法,将有可能影响未来的遗传学研究,而不仅仅是关注的特定病理学。
课程简介: MicroRNAs, endogenous small RNAs, have been suggested to play a role in many pathologies, including neurodegeneration. We recently demonstrated that Dicer activity is impaired in amyotrophic lateral sclerosis (ALS), a neurodegenerative disease of the human motor neuron system, causing dysregulation of miRNA biogenesis. Accordingly, conditional loss of Dicer allele in mice is sufficient to cause motor neuron disease. Nowadays, we are directly testing the existence of causative mutations in microRNA genes in patients suffering from ALS. To this end, in collaboration with project MinE, we performed in silico capture, which calls specific genomic regions of interest from whole genome sequencing data. Our approach enabled us to capture all known microRNA genes, their protein cofactors and the 3' untranslated region of disease-associated genes. We then performed an extensive bioinformatics analysis to identify gene variants that are associated with disease, and further developed methodologies to weight the impact of the newly-identified mutations in miRNA genes. The analysis of miRNA gene mutations in 4300 ALS patients, by in silico capture, is unprecedented. The data and approaches developed to reveal the centrality of noncoding RNA genetics in human disease will plausibly influence future genetics studies, beyond the specific pathology in focus.
关 键 词: microRNA; 神经退行性变; 肌萎缩侧索硬化症
课程来源: 视频讲座网
数据采集: 2021-12-25:zkj
最后编审: 2021-12-25:zkj
阅读次数: 39