0


拉曼光谱中的贝叶斯假设检验

Bayesian Hypotheses Testing in Raman Spectroscopy
课程网址: http://videolectures.net/licsb09_vyshemirsky_bht/  
主讲教师: Vladislav Vyshemirsky
开课单位: 格拉斯哥大学
开课时间: 2009-04-16
课程语种: 英语
中文简介:
表面增强共振拉曼光谱(SERRS)可用于通过使用一组特定的纳米粒子探针来检测多种生物化学物质。使用该技术获得的新数据将通过实现蛋白质浓度的高通量测量,显着提高我们理解生物系统的能力。 SERRS产生的光谱分析通常是手工完成的,解释这些结果的可靠统计方法对于得出有效的结论非常重要。我们使用高斯过程对使用SERRS获得的数据进行建模。这种建模方法可以计算GP的不同协方差函数的边际可能性,因此可以执行一致的假设检验。我们研究了分析生物化学中的几个重要问题:•分析物的光谱响应是否随时间变化,或观察到的变化是否可以通过测量误差来解释•考虑到测量的实际可变性,是否可以测量分析物浓度的差异•用于测量特定蛋白质浓度的信息最丰富的频带是什么?此外,我们使用马尔可夫链蒙特卡罗开发基于光谱数据的GP回归的校准程序,以在协方差函数的超参数上边缘化。
课程简介: Surface enhanced resonance Raman spectroscopy (SERRS) can be used to detect a wide range of biochemical species by employing a specific set of nanoparticle probes. New data obtained using this technology will significantly improve our abilities to understand biological systems by enabling high throughput measurements of protein concentrations. Analysis of spectra produced by SERRS is often done manually, and a solid statistical approach to interpreting such results is very important to draw valid conclusions. We model data obtained using SERRS using Gaussian Processes. This modelling approach enables computing marginal likelihoods over different covariance functions of GPs, and therefore consistent hypotheses testing can be performed. We investigate several important problems in analytical biochemistry: • Whether the spectroscopic response of analytes changes in time, or the observed variations can be explained by measurement errors. • Is it possible to measure the differences in concentrations of an analyte given practical variability of the measurement. • What are the most informative frequency bands to measure the concentration of a given protein with high confidence. We, additionally, develop a calibration procedure based on GP regression of the spectroscopic data using Markov Chain Monte Carlo to marginalise over the hyper-parameters of the covariance function.
关 键 词: 生物化学物质; 蛋白质浓度; 高斯过程
课程来源: 视频讲座网
最后编审: 2019-05-14:lxf
阅读次数: 73