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比较基因组学与基因组多样性

Comparative genomics and genomic biodiversity
课程网址: http://videolectures.net/promogram_peter_dovc_eng/  
主讲教师: Peter Dovč
开课单位: 卢布尔雅那大学
开课时间: 2014-04-14
课程语种: 英语
中文简介:
基因组革命是过去十年基础和应用生物科学发展的显著特点。现代方法在遗传学、分子和细胞生物学以及免疫学中的应用,结合高通量基因组技术,为获取复杂基因组的结构和功能知识开辟了新的领域。该课程是模块化的,重点是研究自然种群和繁殖种群,并采用比较方法研究与健康和生产性状相关的性状的遗传决定。本课程涉及哺乳生物学,重点研究不同物种在不同生理条件下乳腺中乳蛋白表达的调节。除了在调节牛奶成分和牛奶技术特性方面发挥重要作用的基因外,该模块还重点关注调节乳腺发育和感染期间免疫反应的基因。由于其周期性特征,乳腺是包括乳腺退化在内的发育研究的理想模型。对于基因功能的研究,我们采用体外系统,能够在受控条件下和广泛的实验方法分析基因功能。该模块的一个重要方面是研究mRNA的转录后处理和RNA干扰对基因表达的调节。乳腺的周期性发育使得研究干细胞在乳腺发育和肿瘤发生中的作用成为可能。候选基因的检测和动物模型的开发是能量代谢和脂肪沉积相关性状QTL定位模块的重点。候选基因座的识别分为不同的步骤,包括QTL定位、信息标记的开发以及根据其在群体中的生理作用和遗传变异选择候选基因。所选候选基因的遗传变异效应通过所选群体中的关联研究得到验证,然而,我们也正在开发转基因小鼠模型,用于目标基因组区域的体内研究。除了影响能量代谢的因素外,该方案的特别重点是线粒体的生物发生以及核基因组和线粒体基因组之间的相互作用。禽支原体抗原变异的分子基础研究揭示了使宿主免疫系统成功逃逸和禽支原体在免疫活性宿主中存活的分子机制。免疫反应的研究是该计划的一个首要主题,它将该计划的不同模块连接起来,以寻求对抗感染的新解决方案。该模块侧重于自由生活和繁殖种群的种群方面,能够调查种群,建立种群及其历史之间的关系。此外,本单元阐明了稀有和濒危物种的分类地位,并有助于对这些种群进行适当管理。用于人类医学诊断目的的细胞遗传学方法的发展在方法学上与其他模块相联系,并为医学研究开辟了一个比较的方面。
课程简介: Genomic revolution characterized significantly development of basic and applied biological sciences during the last decade. Application of modern methods in genetics, molecular and cell biology and immunology combined with high throughput genomic techniques opened a new horizon for acquisition of knowledge about structure and function of complex genomes. The programme is modular with an accent on the study of natural and breeding populations and comparative approach for study of genetic determination of traits related to health and production traits. The module dealing with the biology of lactation is focused on the regulation of lactoprotein expression in the mammary gland of different species in different physiological conditions. In addition to genes which play an important role in the regulation of milk composition and technological properties of milk is module focused on genes regulating development of the mammary gland and immune response during infections. Due to its cyclic character is mammary gland an ideal model for developmental studies including mammary gland involution. For the study of gene function we apply in vitro systems which enable analysis of gene function under controlled conditions and a wide range of experimental approaches. An important aspect of the module is study of post transcriptional processing of mRNA and modulation of gene expression by RNA interference. The cyclic development of the mammary gland enables study of the role of stem cells in mammary gland development and tumourigenesis. Detection of candidate genes and development of animal models is the focus of the module dealing with QTL mapping for traits related with energy metabolism and fat deposition. Identification of candidate loci is performed in different steps including QTL mapping, development of informative markers and selection of candidate genes according to their physiological role and genetic variation in the population. The effect of genetic variants of selected candidate genes is verified by association studies in selected populations, however, we are also developing transgenic mouse model for in vivo study of target genomic regions. In addition to factors affecting energy metabolism, the special focus of the programme is on biogenesis of mitochondria and interactions between nuclear and mitochondrial genome. The study of molecular basis of antigenic variation in avian mycoplasmas reveals molecular mechanisms which allow successful escape of the host immune system and survival of avian mycoplasmas in immunocompetent host. Study of immune response is an overriding topic of the programme connecting different modules of the programme in the search for novel solutions in the fight against infections. The module focused on population aspect of free living and bred populations enables survey of populations, establishment of relationships between populations and their history. In addition, the module elucidates the taxonomic position of rare and endangered species and contributes to appropriate management of those populations. Development of cytogenetic methods for diagnostic purposes in human medicine is methodologically connected with other modules and opens a comparative aspect into the medical research.
关 键 词: 基因组; 应用生物科学发展; 细胞生物学
课程来源: 视频讲座网
数据采集: 2021-12-11:zkj
最后编审: 2021-12-11:zkj
阅读次数: 40