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对热力学积分的分层路径采样:计算非线性动力系统模型的贝叶斯因子

On stratified path sampling of the Thermodynamic Integral: computing Bayes factors for nonlinear dynamical systems models
课程网址: http://videolectures.net/aispds08_girolami_osps/  
主讲教师: Mark Girolami
开课单位: 格拉斯哥大学
开课时间: 2008-08-05
课程语种: 英语
中文简介:
贝叶斯因子提供了一种根据证据支持客观地对一些合理的统计模型进行排序的方法。贝叶斯因子的计算远不是简单易行的,基于热力学积分的方法可以提供对积分可能性的稳定估计。本文将在计算热力学积分时考虑分层抽样策略,并考虑最优路径和总体估计量的方差等问题。主要应用是基于非线性常微分方程(ODE)系统的动态生化途径模型的贝叶斯因子计算。我们将讨论细胞外调节激酶(erk)途径的大规模研究,其中最近的小干扰RNA(sirna)实验验证了使用计算的Bayes因子做出的预测。
课程简介: Bayes factors provide a means of objectively ranking a number of plausible statistical models based on their evidential support. Computing Bayes factors is far from straightforward and methodology based on thermodynamic integration can provide stable estimates of the integrated likelihood. This talk will consider a stratified sampling strategy in estimating the thermodynamic integral and will consider issues such as optimal paths and the variance of the overall estimator. The main application considered will be the computation of Bayes factors for dynamical biochemical pathway models based on systems of nonlinear ordinary differential equations (ODE). A large scale study of the ExtraCellular Regulated Kinase (ERK) pathway will be discussed where recent Small Interfering RNA (siRNA) experimental validation of the predictions made using the computed Bayes factors is presented.
关 键 词: 非线性动力系统; 贝叶斯因子; 热力学积分; 非线性微分方程
课程来源: 视频讲座网
最后编审: 2019-12-21:lxf
阅读次数: 57