ALS的过去和未来:基因表达谱Gene expression profiling in ALS: past, present and future |
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课程网址: | http://videolectures.net/encals2017_kirby_gene_expression/ |
主讲教师: | Janine Kirby |
开课单位: | 雪菲尔大学 |
开课时间: | 2017-07-21 |
课程语种: | 英语 |
中文简介: | 基因表达谱自上世纪90年代中后期首次被广泛使用以来,已经取得了长足的进步。随着微阵列技术的出现,基因表达谱、微阵列分析和转录组学已成为与取样相关的常用术语来自多种不同组织类型的RNA。这些研究的结果已被用来研究疾病的机制,监测疾病的进展,并确定可作为诊断或预后生物标志物的特定基因或基因特征。在ALS领域,研究人员已经从使用混合的脊髓匀浆,以确保它们有足够的物质,到从死后病例中分离出单个细胞类型,并利用外周组织来确定疾病和患者进展或分层的生物标志物。基因表达谱分析是谢菲尔德使用的一种关键方法,我们最初用它来研究与突变型SOD1相关的疾病机制。我们首次在SOD1相关肌萎缩侧索硬化症的细胞模型中证明了NRF2信号通路的中断,从而将其作为一个潜在的治疗靶点,其他人证明了这一点更广泛地适用于其他形式的肌萎缩侧索硬化症。包括我们自己在内的几个研究小组现在已经确定了以这种途径为靶点的药物,它仍然是治疗干预的一个可行的靶点。另一方面,基因剪接不仅可以作为基因转录的一个重要组成部分,而且还可以作为一个重要的基因转录水平来检测。我们已经证明了在TARDBP和C9orf72相关的ALS以及散发性ALS病例中剪接中断。转录组学也从蛋白质编码基因的取样扩展到非编码的转录物,如miRNAs,它们不仅可以作为更稳定的生物标记物,还可以调节翻译,而且本身就是针对特定靶点的治疗药物。随着RNA测序变得越来越便宜,并且具有识别新转录物和检测更大范围表达水平的优势,基因表达谱分析的未来包括专注于特定细胞区的转录物,作为临床试验的组成部分,甚至可能是诊断程序和治疗决定的标准部分。 |
课程简介: | Gene expression profiling has come a long way since the term was first widely used in the mid to late 1990’s. With the advent of microarrays allowing the expression levels of increasing numbers of genes to be quantified, gene expression profiling, microarray analysis and transcriptomics have become frequently used terms associated with sampling RNA from multiple different tissue types. The results of these studies have been used to investigate disease mechanisms, monitor progression of disease and identify specific genes or gene signatures which could be used as diagnostic or prognostic biomarkers. Within the field of ALS, researchers have moved from using pooled spinal cord homogenates, to ensure they had sufficient material, through to isolating individual cell types from post-mortem cases and utilising peripheral tissues to determine biomarkers of disease and progression or stratification of patients. Gene expression profiling has been a key methodology used in Sheffield and we initially used it to investigate disease mechanisms associated with mutant SOD1. We were the first to demonstrate the disruption of the NRF2 signalling pathway in a cellular model of SOD1-related ALS, thereby establishing this as a potential therapeutic target which others demonstrated was more widely applicable to other forms of ALS. Several groups, including ourselves have now identified drugs targeting this pathway and it remains a viable target for therapeutic intervention. As knowledge of the genome and transcriptome increased, microarrays evolved to sample not only gene-level expression but that of individual exons, allowing alternatively spliced transcripts to be detected; a timely development given the emerging role of RNA metabolism as a key pathogenic mechanism in ALS. We have demonstrated the disruption of splicing in TARDBP and C9orf72-related ALS, as well as in sporadic ALS cases. Transcriptomics has also expanded from sampling protein coding genes to non-coding transcripts such as miRNAs, which have the potential not only to act as more stable biomarkers, but also to regulate translation, and in themselves be used a therapeutic agents against specific targets. With RNA-sequencing now becoming more affordable and with the advantages of identifying novel transcripts and detecting a greater range of expression levels, the future for gene expression profiling includes focusing on transcripts in specific cellular compartments, being an integral part of clinical trials and perhaps even a standard part of diagnostic procedures and therapeutic decisions. |
关 键 词: | 肌萎缩性脊髓侧索硬化症; 基因; 脊髓匀浆物 |
课程来源: | 视频讲座网 |
数据采集: | 2020-12-14:yxd |
最后编审: | 2020-12-14:yxd |
阅读次数: | 67 |